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    <title>Nader Nikbakht — Writing</title>
    <link>https://nader.mit.edu/writing/</link>
    <description>Nader Nikbakht — research scientist at the McGovern Institute for Brain Research at MIT. Neural circuits for learned behavior, recording technology, and NeuroAI.</description>
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    <lastBuildDate>Fri, 28 Aug 2026 21:13:10 +0000</lastBuildDate>
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      <title>Why red light is not darkness</title>
      <link>https://nader.mit.edu/writing/why-red-light-is-not-darkness/</link>
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      <pubDate>Mon, 24 Aug 2026 00:00:00 +0000</pubDate>
      <category>note</category>
      <description>Rodent labs run on red light because the animals supposedly cannot see it. They can — which makes a lot of "dark" experiments something other than dark.</description>
      <content:encoded><![CDATA[<p>Rodent facilities are full of red light, and the reasoning behind it is old and
tidy: rats and mice have no long-wavelength cone, so red is invisible to them.
You get to see what you are doing while the animal stays, functionally, in the
dark.</p>
<p>We ran into this while building a visual–tactile discrimination task, where the
dark condition had to actually be dark. It is not. Rats retain usable visual
capacity under red illumination — enough to keep solving a task that the standard
account says they should be blind to.</p>
<p>The photoreceptor story is not wrong so much as pitched at the wrong level.
Absence of a matched cone class is not absence of absorption. Pigment spectra
have long tails: something peaking near 500 nm still catches 620 nm photons, just
inefficiently — and &ldquo;inefficiently&rdquo; stops mattering once the lamp is bright and
the animal has all night to integrate. A behaving animal will use whatever signal
it has, not the signal our shorthand says it should have.</p>
<p>Two things follow, and neither is subtle. An experiment that treats red light as
the absence of a visual cue is not controlled for that cue. And housing that
treats red light as night is not giving the animals night.</p>
<p>Neither is hard to fix. Both are easy to keep getting wrong, because the
justification sounds mechanistic enough to stop the conversation.</p>
<p>The full argument is in <a href="https://doi.org/10.7554/eLife.66429">eLife</a>.</p>]]></content:encoded>
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    <item>
      <title>A new site</title>
      <link>https://nader.mit.edu/writing/a-new-site/</link>
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      <pubDate>Mon, 24 Aug 2026 00:00:00 +0000</pubDate>
      <category>note</category>
      <description>Rebuilt nader.mit.edu as a handful of static files, with somewhere to put short notes.</description>
      <content:encoded><![CDATA[<p>I have rebuilt this site. It is now a few hundred lines of HTML and CSS, generated
from Markdown by a small Python script, with no framework underneath it.</p>
<p>The reason is the section you are reading. I wanted a place for things that are too
short for a paper and too specific for a talk — a measurement that surprised me, a
piece of instrumentation that turned out to matter, an argument I keep having in
lab meeting. Those only get written if writing them is nearly free.</p>
<p>Longer pieces will appear here too. Both live in the same list.</p>]]></content:encoded>
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